mini-ITX boards are not compatibles with this case. Technically they are, you have the holes for the screws, but unless you find a mobo that has the CPU very close to the the side panel, plus nothing anywhere close to the heatpipes, you have to fall back on a micro ATX.
I did find that the EVGA 111-IB-E692-KR could work, also I'm not 100% about the CPU power connector. it seems a bit too close to the heatpipes.
I already spent a lot of time to look for a ivy bridge mobo and for some reasons, manufacturers have decided to put the CPU far away from the case side. Some older mini ATX mobo with chipset don't have this issue, though.