No, that's correct - I had to go through and play with it a bit to get things to align up properly. Labeling becomes even more critical when doing this kind of work, otherwise you wind up chasing your tail.
I'm going to take a break and watch a movie before trying to tackle the sub distance tweak.
PJ - Sony VPLHW45ES / Screen - EliteScreens 120" CineGrey / BD - Sony BDP-S5100 / AVR - Yamaha RX-A3030
Speakers - B&W 683S2/ HTM61S2 / 685 Surrounds / Fluance Signature Bi-polar Rear Surrounds/ PSA S1500 & XS15se subs