The current LAV Filter version with installer overrides the registry key HKEY_CLASSES_ROOT(\\Wow6432Node)\\Media Type\\Extensions\\.mkv (or whatever file extension Haali/LAV Splitter supports, e.g. m2ts). Wow6432Node is for the 64-bit OS. So you don't have to uninstall Haali. (However if you reinstall Haali, the key will be overridden again.)
As for MPC-HC, disable (i.e. uncheck) the internal splitter(s). Then the splitter in the above registry key will be used.
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